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Research ArticleBasic Science Investigations

Comprehensive Approach to Coregistration of Autoradiography and Microscopy Images Acquired from a Set of Sequential Tissue Sections

Marian Axente, Jun He, Christopher P. Bass, Jerry I. Hirsch, Gobalakrishnan Sundaresan, Jamal Zweit and Andrei Pugachev
Journal of Nuclear Medicine October 2011, 52 (10) 1621-1629; DOI: https://doi.org/10.2967/jnumed.111.091595
Marian Axente
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Jun He
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Christopher P. Bass
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Jerry I. Hirsch
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Gobalakrishnan Sundaresan
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Jamal Zweit
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Andrei Pugachev
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  • FIGURE 1.
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    FIGURE 1.

    Image acquisition and registration scheme. Green double arrows represent rigid point-set registration used for autoradiography and Hoechst images from reference section. Blue dashed arrows represent manual rigid registration of microscopy images from nonreference sections. Red solid arrows correspond to Hoechst-based deformable registration.

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    FIGURE 2.

    Fragments of Hoechst images acquired from 2 consecutive sections showing corresponding landmark indicated with white cross.

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    FIGURE 3.

    Transparent overlay in false colors of 14C-FDG autoradiography (red), 18F-FLT autoradiography (green), and Hoechst (light blue). (A and C) Images manually registered on basis of observed tissue outline. (B and D) Same images after rigid point-set registration.

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    FIGURE 4.

    (A) Distribution of displacement values between corresponding landmarks after rigid point-set image registration (Hoechst image registered to 18F-FLT autoradiogram and 14C-FDG autoradiogram registered to 18F-FLT autoradiogram). (B) Distribution of displacement values between corresponding landmarks: before deformable image registration (red dotted line) and after deformable image registration (blue continuous line).

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    FIGURE 5.

    Transparent overlays of: (A and B) Hoechst images corresponding to section −1 (light blue) and section +1 (red); (C and D) pimonidazole from section −1 (green) and Hoechst from section +1 (red). Left panels present images before Hoechst-based registration, and right panels present same images after registration. Arrow indicates area highlighting how initial misalignment was corrected by deformable registration.

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Journal of Nuclear Medicine: 52 (10)
Journal of Nuclear Medicine
Vol. 52, Issue 10
October 1, 2011
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Comprehensive Approach to Coregistration of Autoradiography and Microscopy Images Acquired from a Set of Sequential Tissue Sections
Marian Axente, Jun He, Christopher P. Bass, Jerry I. Hirsch, Gobalakrishnan Sundaresan, Jamal Zweit, Andrei Pugachev
Journal of Nuclear Medicine Oct 2011, 52 (10) 1621-1629; DOI: 10.2967/jnumed.111.091595

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Comprehensive Approach to Coregistration of Autoradiography and Microscopy Images Acquired from a Set of Sequential Tissue Sections
Marian Axente, Jun He, Christopher P. Bass, Jerry I. Hirsch, Gobalakrishnan Sundaresan, Jamal Zweit, Andrei Pugachev
Journal of Nuclear Medicine Oct 2011, 52 (10) 1621-1629; DOI: 10.2967/jnumed.111.091595
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