Virtual histological staining of unlabelled tissue-autofluorescence images via deep learning

…, JE Zuckerman, T Chong, AE Sisk… - Nature biomedical …, 2019 - nature.com
The histological analysis of tissue samples, widely used for disease diagnosis, involves
lengthy and laborious tissue preparation. Here, we show that a convolutional neural network …

[HTML][HTML] Deep learning-based transformation of H&E stained tissues into special stains

…, Y Zhang, JE Zuckerman, T Liu, AE Sisk… - Nature …, 2021 - nature.com
Pathology is practiced by visual inspection of histochemically stained tissue slides. While
the hematoxylin and eosin (H&E) stain is most commonly used, special stains can provide …

Comparison of targeted vs systematic prostate biopsy in men who are biopsy naive: the prospective assessment of image registration in the diagnosis of prostate …

FF Elkhoury, ER Felker, L Kwan, AE Sisk, M Delfin… - JAMA …, 2019 - jamanetwork.com
Importance Magnetic resonance imaging (MRI) guidance improves the accuracy of prostate
biopsy for the detection of clinically significant prostate cancer, but the optimal use of such …

Targeted prostate biopsy: umbra, penumbra, and value of perilesional sampling

…, J Ballon, L Kwan, MK Delfin, ER Felker, AE Sisk… - European urology, 2022 - Elsevier
Background Systematic prostate biopsies add to the cancer detection rate of targeted biopsies,
but the explanation for that increased sensitivity is not yet clear. Objective To determine …

Head-to-head comparison of 68Ga-PSMA-11 PET/CT and mpMRI with a histopathology gold standard in the detection, intraprostatic localization, and determination of …

I Sonni, ER Felker, AT Lenis, AE Sisk… - Journal of Nuclear …, 2022 - Soc Nuclear Med
The role of prostate-specific membrane antigen (PSMA)–targeted PET in comparison to
multiparametric MRI (mpMRI) in the evaluation of intraprostatic cancer foci is not well defined. …

Papillary renal cell carcinoma

N Mendhiratta, P Muraki, AE Sisk Jr, B Shuch - … Oncology: Seminars and …, 2021 - Elsevier
Kidney cancer is the 13th most common malignancy globally, and the incidence is rising.
Papillary renal cell carcinoma is the second most common subtype, comprising 10-15% of …

Molecular hallmarks of multiparametric magnetic resonance imaging visibility in prostate cancer

…, V Huang, SS Raman, P Ahuja, AE Sisk Jr… - European urology, 2019 - Elsevier
Multiparametric magnetic resonance imaging (mpMRI) has transformed the management of
localized prostate cancer by improving identification of clinically significant disease at …

Predicting pathological tumor size in prostate cancer based on multiparametric prostate magnetic resonance imaging and preoperative findings

…, J Shirk, D Markovic, TY Sadun, AE Sisk Jr… - The Journal of …, 2021 - auajournals.org
Purpose: Oncologic efficacy of focal therapies in prostate cancer depends heavily on accurate
tumor size estimation. We aim to evaluate the agreement between radiologic tumor size …

Prostate microstructure in prostate cancer using 3-T MRI with diffusion-relaxation correlation spectrum imaging: validation with whole-mount digital histopathology

…, M Hosseiny, A Azadikhah, K Sung, RE Reiter, AE Sisk… - Radiology, 2020 - pubs.rsna.org
Background Microstructural MRI has the potential to improve diagnosis and characterization
of prostate cancer (PCa), but validation with histopathology is lacking. Purpose To validate …

Regulation of telomere homeostasis and genomic stability in cancer by N6-adenosine methylation (m6A)

…, HM Lam, J Garcia, MP Roudier, AE Sisk… - Science …, 2021 - science.org
The role of RNA methylation on N 6 -adenosine (m 6 A) in cancer has been acknowledged,
but the underlying mechanisms remain obscure. Here, we identified homeobox containing 1 (…